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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0432120

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0432120
Locus	HORVU.MOREX.r2.5HG0432120.1
URL	Gene Ontology GO:0000166 [ Show all 12 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 14 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: E3 ubiquitin protein ligase DRIP2 GO:0000166; molecular_function; nucleotide binding GO:0004163; molecular_function; diphosphomevalonate decarboxylase activity GO:0005524; molecular_function; ATP binding GO:0005829; cellular_component; cytosol GO:0006629; biological_process; lipid metabolic process GO:0006694; biological_process; steroid biosynthetic process GO:0008202; biological_process; steroid metabolic process GO:0008299; biological_process; isoprenoid biosynthetic process GO:0016126; biological_process; sterol biosynthetic process GO:0016829; molecular_function; lyase activity GO:0016831; molecular_function; carboxy-lyase activity GO:0019287; biological_process; isopentenyl diphosphate biosynthetic process, mevalonate pathway
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0432120.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)