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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0431410

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0431410
Locus	HORVU.MOREX.r2.5HG0431410.1
URL	Gene Ontology GO:0000062 [ Show all 19 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 21 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Transmembrane protein 97 GO:0000062; molecular_function; fatty-acyl-CoA binding GO:0004772; molecular_function; sterol O-acyltransferase activity GO:0005783; cellular_component; endoplasmic reticulum GO:0005789; cellular_component; endoplasmic reticulum membrane GO:0005903; cellular_component; brush border GO:0006629; biological_process; lipid metabolic process GO:0008202; biological_process; steroid metabolic process GO:0008203; biological_process; cholesterol metabolic process GO:0008374; molecular_function; O-acyltransferase activity GO:0015485; molecular_function; cholesterol binding GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016740; molecular_function; transferase activity GO:0016746; molecular_function; transferase activity, transferring acyl groups GO:0033344; biological_process; cholesterol efflux GO:0034379; biological_process; very-low-density lipoprotein particle assembly GO:0034435; biological_process; cholesterol esterification GO:0034736; molecular_function; cholesterol O-acyltransferase activity GO:0042632; biological_process; cholesterol homeostasis
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0431410.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)