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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0430710

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0430710
Locus	HORVU.MOREX.r2.5HG0430710.1
URL	Gene Ontology GO:0000291 [ Show all 25 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 27 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Protein FRIGIDA GO:0000291; biological_process; nuclear-transcribed mRNA catabolic process, exonucleolytic GO:0000932; cellular_component; P-body GO:0003676; molecular_function; nucleic acid binding GO:0003729; molecular_function; mRNA binding GO:0004518; molecular_function; nuclease activity GO:0004527; molecular_function; exonuclease activity GO:0004534; molecular_function; 5'-3' exoribonuclease activity GO:0005634; cellular_component; nucleus GO:0005829; cellular_component; cytosol GO:0005844; cellular_component; polysome GO:0006139; biological_process; nucleobase-containing compound metabolic process GO:0006397; biological_process; mRNA processing GO:0006402; biological_process; mRNA catabolic process GO:0008270; molecular_function; zinc ion binding GO:0009826; biological_process; unidimensional cell growth GO:0010087; biological_process; phloem or xylem histogenesis GO:0010286; biological_process; heat acclimation GO:0010494; cellular_component; cytoplasmic stress granule GO:0010587; biological_process; miRNA catabolic process GO:0016787; molecular_function; hydrolase activity GO:0031087; biological_process; deadenylation-independent decapping of nuclear-transcribed mRNA GO:0040029; biological_process; regulation of gene expression, epigenetic GO:0051301; biological_process; cell division GO:0070370; biological_process; cellular heat acclimation GO:0090503; biological_process; RNA phosphodiester bond hydrolysis, exonucleolytic
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0430710.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)