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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0429150

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0429150
Locus	HORVU.MOREX.r2.5HG0429150.1
URL	Gene Ontology GO:0010175 [ Show all 10 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 13 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Splicing factor U2af small subunit A GO:0140338; molecular_function; sphingomyelin transfer activity The GO term GO:0010175 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0140338 GO:0005737; cellular_component; cytoplasm GO:0008219; biological_process; cell death GO:0009751; biological_process; response to salicylic acid GO:0009816; biological_process; defense response to bacterium, incompatible interaction GO:0015695; biological_process; organic cation transport GO:0015791; biological_process; polyol transport GO:0072488; biological_process; ammonium transmembrane transport GO:0120009; biological_process; intermembrane lipid transfer GO:0120013; molecular_function; lipid transfer activity
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0429150.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)