Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: HORVU.MOREX.r2.5HG0419210

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0419210
Locus	HORVU.MOREX.r2.5HG0419210.1
URL	[ Hide all but 1 of 46 ] Gene Ontology GO:0003676 Gene Ontology GO:0003677 Gene Ontology GO:0003723 Gene Ontology GO:0003824 Gene Ontology GO:0003887 Gene Ontology GO:0003964 Gene Ontology GO:0004190 Gene Ontology GO:0004518 Gene Ontology GO:0004519 Gene Ontology GO:0004523 Gene Ontology GO:0004533 Gene Ontology GO:0005198 Gene Ontology GO:0006278 Gene Ontology GO:0006310 Gene Ontology GO:0006508 Gene Ontology GO:0008152 Gene Ontology GO:0008233 Gene Ontology GO:0008270 Gene Ontology GO:0008289 Gene Ontology GO:0015074 Gene Ontology GO:0016020 Gene Ontology GO:0016032 Gene Ontology GO:0016740 Gene Ontology GO:0016779 Gene Ontology GO:0016787 Gene Ontology GO:0019012 Gene Ontology GO:0019013 Gene Ontology GO:0019028 Gene Ontology GO:0020002 Gene Ontology GO:0030430 Gene Ontology GO:0033644 Gene Ontology GO:0039526 Gene Ontology GO:0039651 Gene Ontology GO:0039657 Gene Ontology GO:0042025 Gene Ontology GO:0044174 Gene Ontology GO:0044826 Gene Ontology GO:0046718 Gene Ontology GO:0046872 Gene Ontology GO:0055036 Gene Ontology GO:0072494 Gene Ontology GO:0075713 Gene Ontology GO:0075732 Gene Ontology GO:0090305 Gene Ontology GO:0090502 Gene Ontology GO:0090503
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). [ Show all 48 ]
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0419210.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)