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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0417720

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0417720
Locus	HORVU.MOREX.r2.5HG0417720.1
URL	Gene Ontology GO:0000027 [ Show all 16 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 18 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Histone H4 GO:0000027; biological_process; ribosomal large subunit assembly GO:0000166; molecular_function; nucleotide binding GO:0000470; biological_process; maturation of LSU-rRNA GO:0003676; molecular_function; nucleic acid binding GO:0003723; molecular_function; RNA binding GO:0004386; molecular_function; helicase activity GO:0005524; molecular_function; ATP binding GO:0005634; cellular_component; nucleus GO:0005654; cellular_component; nucleoplasm GO:0005730; cellular_component; nucleolus GO:0006364; biological_process; rRNA processing GO:0016787; molecular_function; hydrolase activity GO:0030686; cellular_component; 90S preribosome GO:0030687; cellular_component; preribosome, large subunit precursor GO:0042254; biological_process; ribosome biogenesis GO:1902626; biological_process; assembly of large subunit precursor of preribosome
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0417720.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)