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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0414950

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0414950
Locus	HORVU.MOREX.r2.5HG0414950.1
URL	Gene Ontology GO:0001523 [ Show all 14 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 16 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Short-chain dehydrogenase/reductase GO:0001523; biological_process; retinoid metabolic process GO:0003151; biological_process; outflow tract morphogenesis GO:0004745; molecular_function; retinol dehydrogenase activity GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016491; molecular_function; oxidoreductase activity GO:0030278; biological_process; regulation of ossification GO:0042572; biological_process; retinol metabolic process GO:0048387; biological_process; negative regulation of retinoic acid receptor signaling pathway GO:0052650; molecular_function; NADP-retinol dehydrogenase activity GO:0055114; biological_process; oxidation-reduction process GO:0060021; biological_process; roof of mouth development GO:0060349; biological_process; bone morphogenesis GO:0060411; biological_process; cardiac septum morphogenesis
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0414950.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)