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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0414940

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0414940
Locus	HORVU.MOREX.r2.5HG0414940.1
URL	Gene Ontology GO:0004518 [ Show all 8 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 10 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Short-chain dehydrogenase/reductase 3 GO:0004518; molecular_function; nuclease activity GO:0006281; biological_process; DNA repair GO:0006974; biological_process; cellular response to DNA damage stimulus GO:0008270; molecular_function; zinc ion binding GO:0016829; molecular_function; lyase activity GO:0046872; molecular_function; metal ion binding GO:0090305; biological_process; nucleic acid phosphodiester bond hydrolysis GO:0140078; molecular_function; class I DNA-(apurinic or apyrimidinic site) endonuclease activity
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0414940.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)