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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0407860

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0407860
Locus	HORVU.MOREX.r2.5HG0407860.1
URL	Gene Ontology GO:0000166 [ Show all 23 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 25 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Mitochondrial carrier family GO:0000166; molecular_function; nucleotide binding GO:0001933; biological_process; negative regulation of protein phosphorylation GO:0002376; biological_process; immune system process GO:0003677; molecular_function; DNA binding GO:0004674; molecular_function; protein serine/threonine kinase activity GO:0004677; molecular_function; DNA-dependent protein kinase activity GO:0005524; molecular_function; ATP binding GO:0005634; cellular_component; nucleus GO:0005730; cellular_component; nucleolus GO:0006281; biological_process; DNA repair GO:0006303; biological_process; double-strand break repair via nonhomologous end joining GO:0006310; biological_process; DNA recombination GO:0006468; biological_process; protein phosphorylation GO:0006974; biological_process; cellular response to DNA damage stimulus GO:0016301; molecular_function; kinase activity GO:0016310; biological_process; phosphorylation GO:0016740; molecular_function; transferase activity GO:0042752; biological_process; regulation of circadian rhythm GO:0045087; biological_process; innate immune response GO:0048511; biological_process; rhythmic process GO:0048660; biological_process; regulation of smooth muscle cell proliferation GO:0070419; cellular_component; nonhomologous end joining complex GO:0072431; biological_process; signal transduction involved in mitotic G1 DNA damage checkpoint
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0407860.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)