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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0400660

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0400660
Locus	HORVU.MOREX.r2.5HG0400660.1
URL	Gene Ontology GO:0005605 [ Show all 17 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 19 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Cinnamoyl CoA reductase GO:0005604; cellular_component; basement membrane The GO term GO:0005605 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0005604 GO:0005201; molecular_function; extracellular matrix structural constituent GO:0005515; molecular_function; protein binding GO:0005576; cellular_component; extracellular region GO:0005606; cellular_component; laminin-1 complex GO:0005615; cellular_component; extracellular space GO:0007155; biological_process; cell adhesion GO:0016477; biological_process; cell migration GO:0022617; biological_process; extracellular matrix disassembly GO:0031012; cellular_component; extracellular matrix GO:0031175; biological_process; neuron projection development GO:0031581; biological_process; hemidesmosome assembly GO:0034446; biological_process; substrate adhesion-dependent cell spreading GO:0043208; molecular_function; glycosphingolipid binding GO:0043259; cellular_component; laminin-10 complex GO:0065003; biological_process; protein-containing complex assembly
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0400660.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)