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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0400500

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0400500
Locus	HORVU.MOREX.r2.5HG0400500.1
URL	Gene Ontology GO:0005506 [ Show all 16 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 18 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Ubiquitin, putative GO:0005506; molecular_function; iron ion binding GO:0008137; molecular_function; NADH dehydrogenase (ubiquinone) activity GO:0009507; cellular_component; chloroplast GO:0009535; cellular_component; chloroplast thylakoid membrane GO:0009536; cellular_component; plastid GO:0009579; cellular_component; thylakoid GO:0016020; cellular_component; membrane GO:0016491; molecular_function; oxidoreductase activity GO:0016651; molecular_function; oxidoreductase activity, acting on NAD(P)H GO:0016655; molecular_function; oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor GO:0019684; biological_process; photosynthesis, light reaction GO:0046872; molecular_function; metal ion binding GO:0048038; molecular_function; quinone binding GO:0051536; molecular_function; iron-sulfur cluster binding GO:0051539; molecular_function; 4 iron, 4 sulfur cluster binding GO:0055114; biological_process; oxidation-reduction process
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0400500.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)