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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0368520

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0368520
Locus	HORVU.MOREX.r2.5HG0368520.1
URL	Gene Ontology GO:0000166 [ Show all 23 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 25 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Calmodulin-binding protein, putative, expressed GO:0000166; molecular_function; nucleotide binding GO:0000226; biological_process; microtubule cytoskeleton organization GO:0001578; biological_process; microtubule bundle formation GO:0003774; molecular_function; motor activity GO:0003777; molecular_function; microtubule motor activity GO:0003779; molecular_function; actin binding GO:0005524; molecular_function; ATP binding GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0005874; cellular_component; microtubule GO:0005881; cellular_component; cytoplasmic microtubule GO:0005884; cellular_component; actin filament GO:0007018; biological_process; microtubule-based movement GO:0008017; molecular_function; microtubule binding GO:0008092; molecular_function; cytoskeletal protein binding GO:0008569; molecular_function; ATP-dependent microtubule motor activity, minus-end-directed GO:0016887; molecular_function; ATPase activity GO:0030036; biological_process; actin cytoskeleton organization GO:0043229; cellular_component; intracellular organelle GO:0051015; molecular_function; actin filament binding GO:0051017; biological_process; actin filament bundle assembly GO:0055028; cellular_component; cortical microtubule GO:0090378; biological_process; seed trichome elongation
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0368520.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)