GrainGenes Probe Report: HORVU.MOREX.r2.5HG0359210
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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
Probe
HORVU.MOREX.r2.5HG0359210
Locus
HORVU.MOREX.r2.5HG0359210.1
URL
Gene Ontology GO:0000166
[ Show all 11 ]
Reference
Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 13 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Retrotransposon protein, putative, Ty1-copia subclass GO:0000166; molecular_function; nucleotide binding GO:0005524; molecular_function; ATP binding GO:0005886; cellular_component; plasma membrane GO:0008643; biological_process; carbohydrate transport GO:0015407; molecular_function; ATPase-coupled monosaccharide transmembrane transporter activity GO:0015749; biological_process; monosaccharide transmembrane transport GO:0016020; cellular_component; membrane GO:0016787; molecular_function; hydrolase activity GO:0016887; molecular_function; ATPase activity GO:0034219; biological_process; carbohydrate transmembrane transport GO:0043211; molecular_function; ATPase-coupled carbohydrate transmembrane transporter activity
Type
Genomic
Sequence
HORVU.MOREX.r2.5HG0359210.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)
GrainGenes Probe Report: HORVU.MOREX.r2.5HG0359210
[Submit comment/correction][What is a probe?]
Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
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