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GrainGenes Probe Report: HORVU.MOREX.r2.4HG0348810

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.4HG0348810
Locus	HORVU.MOREX.r2.4HG0348810.1
URL	Gene Ontology GO:0015321 [ Show all 54 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 56 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: RING/U-box superfamily protein GO:0005436; molecular_function; sodium:phosphate symporter activity The GO term GO:0015321 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0005436 GO:0001503; biological_process; ossification GO:0001822; biological_process; kidney development GO:0005768; cellular_component; endosome GO:0005886; cellular_component; plasma membrane GO:0006811; biological_process; ion transport GO:0006814; biological_process; sodium ion transport GO:0006817; biological_process; phosphate ion transport GO:0007584; biological_process; response to nutrient GO:0009100; biological_process; glycoprotein metabolic process GO:0009986; cellular_component; cell surface GO:0010288; biological_process; response to lead ion GO:0015293; molecular_function; symporter activity GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016324; cellular_component; apical plasma membrane GO:0016607; cellular_component; nuclear speck GO:0030165; molecular_function; PDZ domain binding GO:0030643; biological_process; cellular phosphate ion homeostasis GO:0031226; cellular_component; intrinsic component of plasma membrane GO:0031526; cellular_component; brush border membrane GO:0032026; biological_process; response to magnesium ion GO:0032355; biological_process; response to estradiol GO:0033189; biological_process; response to vitamin A GO:0035725; biological_process; sodium ion transmembrane transport GO:0035864; biological_process; response to potassium ion GO:0042431; biological_process; indole metabolic process GO:0042493; biological_process; response to drug GO:0042803; molecular_function; protein homodimerization activity GO:0043434; biological_process; response to peptide hormone GO:0044341; biological_process; sodium-dependent phosphate transport GO:0044877; molecular_function; protein-containing complex binding GO:0045121; cellular_component; membrane raft GO:0045838; biological_process; positive regulation of membrane potential GO:0046686; biological_process; response to cadmium ion GO:0046689; biological_process; response to mercury ion GO:0048471; cellular_component; perinuclear region of cytoplasm GO:0051260; biological_process; protein homooligomerization GO:0055062; biological_process; phosphate ion homeostasis GO:0060416; biological_process; response to growth hormone GO:0071107; biological_process; response to parathyroid hormone GO:0071248; biological_process; cellular response to metal ion GO:0071374; biological_process; cellular response to parathyroid hormone stimulus GO:0072350; biological_process; tricarboxylic acid metabolic process GO:0072686; cellular_component; mitotic spindle GO:0072734; biological_process; cellular response to staurosporine GO:0097066; biological_process; response to thyroid hormone GO:0097187; biological_process; dentinogenesis GO:1901128; biological_process; gentamycin metabolic process GO:1901652; biological_process; response to peptide GO:1901684; biological_process; arsenate ion transmembrane transport GO:2000120; biological_process; positive regulation of sodium-dependent phosphate transport GO:2000187; biological_process; positive regulation of phosphate transmembrane transport
Type	Genomic
Sequence	HORVU.MOREX.r2.4HG0348810.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)