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GrainGenes Probe Report: HORVU.MOREX.r2.4HG0346890

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
HORVU.MOREX.r2.4HG0346890
Locus
HORVU.MOREX.r2.4HG0346890.1
URL
Gene Ontology GO:0003824
[ Show all 7 ]
Reference
ReferenceMonat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 9 ]
Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database).
Functional annotation published with the genome: auxin canalization protein (DUF828)
GO:0003824; molecular_function; catalytic activity
GO:0004479; molecular_function; methionyl-tRNA formyltransferase activity
GO:0006413; biological_process; translational initiation
GO:0009058; biological_process; biosynthetic process
GO:0016740; molecular_function; transferase activity
GO:0016742; molecular_function; hydroxymethyl-, formyl- and related transferase activity
GO:0071951; biological_process; conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
Type
Genomic
Sequence
HORVU.MOREX.r2.4HG0346890.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)