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GrainGenes Probe Report: HORVU.MOREX.r2.4HG0346820

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
HORVU.MOREX.r2.4HG0346820
Locus
HORVU.MOREX.r2.4HG0346820.1
URL
Gene Ontology GO:0003676
[ Show all 8 ]
Reference
ReferenceMonat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 10 ]
Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database).
Functional annotation published with the genome: PHD-finger protein
GO:0003676; molecular_function; nucleic acid binding
GO:0003899; molecular_function; DNA-directed 5'-3' RNA polymerase activity
GO:0005634; cellular_component; nucleus
GO:0005730; cellular_component; nucleolus
GO:0006351; biological_process; transcription, DNA-templated
GO:0006379; biological_process; mRNA cleavage
GO:0008270; molecular_function; zinc ion binding
GO:0046872; molecular_function; metal ion binding
Type
Genomic
Sequence
HORVU.MOREX.r2.4HG0346820.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)