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GrainGenes Probe Report: HORVU.MOREX.r2.4HG0341690

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
HORVU.MOREX.r2.4HG0341690
Locus
HORVU.MOREX.r2.4HG0341690.1
URL
Gene Ontology GO:0004004
[ Show all 7 ]
Reference
ReferenceMonat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 10 ]
Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database).
Functional annotation published with the genome: Calcium-binding EF hand-containing protein
GO:0003724; molecular_function; RNA helicase activity
The GO term GO:0004004 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0003724
GO:0003676; molecular_function; nucleic acid binding
GO:0004386; molecular_function; helicase activity
GO:0005524; molecular_function; ATP binding
GO:0005730; cellular_component; nucleolus
GO:0005737; cellular_component; cytoplasm
GO:0010501; biological_process; RNA secondary structure unwinding
Type
Genomic
Sequence
HORVU.MOREX.r2.4HG0341690.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)