GrainGenes Probe Report: HORVU.MOREX.r2.4HG0337310
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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
Probe
HORVU.MOREX.r2.4HG0337310
Locus
HORVU.MOREX.r2.4HG0337310.1
URL
Gene Ontology GO:0000502
[ Show all 12 ]
Reference
Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 14 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: myosin-like protein XIF GO:0000502; cellular_component; proteasome complex GO:0004175; molecular_function; endopeptidase activity GO:0004298; molecular_function; threonine-type endopeptidase activity GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0005839; cellular_component; proteasome core complex GO:0006508; biological_process; proteolysis GO:0006511; biological_process; ubiquitin-dependent protein catabolic process GO:0008233; molecular_function; peptidase activity GO:0016787; molecular_function; hydrolase activity GO:0019773; cellular_component; proteasome core complex, alpha-subunit complex GO:0051603; biological_process; proteolysis involved in cellular protein catabolic process
Type
Genomic
Sequence
HORVU.MOREX.r2.4HG0337310.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)
GrainGenes Probe Report: HORVU.MOREX.r2.4HG0337310
[Submit comment/correction][What is a probe?]
Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
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