Query (optional)   in Class  

GrainGenes Probe Report: HORVU.MOREX.r2.4HG0336720

[Submit comment/correction][What is a probe?]

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
HORVU.MOREX.r2.4HG0336720
Locus
HORVU.MOREX.r2.4HG0336720.1
URL
Gene Ontology GO:0000105
[ Show all 10 ]
Reference
ReferenceMonat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 12 ]
Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database).
Functional annotation published with the genome: Transcription initiation factor IIE subunit beta
GO:0000105; biological_process; histidine biosynthetic process
GO:0000166; molecular_function; nucleotide binding
GO:0000287; molecular_function; magnesium ion binding
GO:0003879; molecular_function; ATP phosphoribosyltransferase activity
GO:0005524; molecular_function; ATP binding
GO:0005737; cellular_component; cytoplasm
GO:0008652; biological_process; cellular amino acid biosynthetic process
GO:0016740; molecular_function; transferase activity
GO:0016757; molecular_function; transferase activity, transferring glycosyl groups
GO:0046872; molecular_function; metal ion binding
Type
Genomic
Sequence
HORVU.MOREX.r2.4HG0336720.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)