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GrainGenes Probe Report: HORVU.MOREX.r2.4HG0335810

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.4HG0335810
Locus	HORVU.MOREX.r2.4HG0335810.1
URL	Gene Ontology GO:0036439 [ Show all 18 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 20 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Patatin GO:0047952; molecular_function; glycerol-3-phosphate dehydrogenase [NAD(P)+] activity The GO term GO:0036439 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0047952 GO:0004367; molecular_function; glycerol-3-phosphate dehydrogenase [NAD+] activity GO:0005737; cellular_component; cytoplasm GO:0005975; biological_process; carbohydrate metabolic process GO:0006072; biological_process; glycerol-3-phosphate metabolic process GO:0006629; biological_process; lipid metabolic process GO:0006650; biological_process; glycerophospholipid metabolic process GO:0008654; biological_process; phospholipid biosynthetic process GO:0009331; cellular_component; glycerol-3-phosphate dehydrogenase complex GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016491; molecular_function; oxidoreductase activity GO:0016616; molecular_function; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0046167; biological_process; glycerol-3-phosphate biosynthetic process GO:0046168; biological_process; glycerol-3-phosphate catabolic process GO:0051287; molecular_function; NAD binding GO:0055114; biological_process; oxidation-reduction process
Type	Genomic
Sequence	HORVU.MOREX.r2.4HG0335810.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)