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GrainGenes Probe Report: HORVU.MOREX.r2.4HG0333510

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.4HG0333510
Locus	HORVU.MOREX.r2.4HG0333510.1
URL	Gene Ontology GO:0003690 [ Show all 11 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 13 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Transcription factor GO:0003690; molecular_function; double-stranded DNA binding GO:0003727; molecular_function; single-stranded RNA binding GO:0005739; cellular_component; mitochondrion GO:0006351; biological_process; transcription, DNA-templated GO:0006355; biological_process; regulation of transcription, DNA-templated GO:0008380; biological_process; RNA splicing GO:0019843; molecular_function; rRNA binding GO:0032502; biological_process; developmental process GO:0042255; biological_process; ribosome assembly GO:0044212; molecular_function; transcription regulatory region DNA binding GO:0045892; biological_process; negative regulation of transcription, DNA-templated
Type	Genomic
Sequence	HORVU.MOREX.r2.4HG0333510.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)