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GrainGenes Probe Report: HORVU.MOREX.r2.4HG0321020

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.4HG0321020
Locus	HORVU.MOREX.r2.4HG0321020.1
URL	Gene Ontology GO:0061505 [ Show all 16 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 19 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: DNA topoisomerase 6 subunit A The GO term GO:0061505 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0003918 GO:0000166; molecular_function; nucleotide binding GO:0000287; molecular_function; magnesium ion binding GO:0000737; biological_process; DNA catabolic process, endonucleolytic GO:0003677; molecular_function; DNA binding GO:0003824; molecular_function; catalytic activity GO:0003916; molecular_function; DNA topoisomerase activity GO:0003918; molecular_function; DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity GO:0005524; molecular_function; ATP binding GO:0005634; cellular_component; nucleus GO:0005694; cellular_component; chromosome GO:0006259; biological_process; DNA metabolic process GO:0006265; biological_process; DNA topological change GO:0009330; cellular_component; DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex GO:0016853; molecular_function; isomerase activity GO:0046872; molecular_function; metal ion binding
Type	Genomic
Sequence	HORVU.MOREX.r2.4HG0321020.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)