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GrainGenes Probe Report: HORVU.MOREX.r2.4HG0320070
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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe
HORVU.MOREX.r2.4HG0320070

Locus
HORVU.MOREX.r2.4HG0320070.1

URL
Gene Ontology GO:0003824

[ Show all 14 ]

Reference

Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.

General Remarks
[ Hide all but 1 of 16 ]
Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta).
Functional annotation published with the genome: E3 ubiquitin-protein ligase
GO:0003824; molecular_function; catalytic activity
GO:0006629; biological_process; lipid metabolic process
GO:0008152; biological_process; metabolic process
GO:0009058; biological_process; biosynthetic process
GO:0009103; biological_process; lipopolysaccharide biosynthetic process
GO:0009245; biological_process; lipid A biosynthetic process
GO:0016491; molecular_function; oxidoreductase activity
GO:0016740; molecular_function; transferase activity
GO:0016742; molecular_function; hydroxymethyl-, formyl- and related transferase activity
GO:0046677; biological_process; response to antibiotic
GO:0050662; molecular_function; coenzyme binding
GO:0055114; biological_process; oxidation-reduction process
GO:0099618; molecular_function; UDP-glucuronic acid dehydrogenase activity
GO:0099619; molecular_function; UDP-4-amino-4-deoxy-L-arabinose formyltransferase activity

Type
Genomic

Sequence
HORVU.MOREX.r2.4HG0320070.1

Source Species
Hordeum vulgare

Source Germplasm
Morex (barley)