Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: HORVU.MOREX.r2.4HG0317910

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.4HG0317910
Locus	HORVU.MOREX.r2.4HG0317910.1
URL	Gene Ontology GO:0005515 [ Show all 18 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 20 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Histone-lysine N-methyltransferase GO:0005515; molecular_function; protein binding GO:0005886; cellular_component; plasma membrane GO:0005911; cellular_component; cell-cell junction GO:0005923; cellular_component; bicellular tight junction GO:0009986; cellular_component; cell surface GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016324; cellular_component; apical plasma membrane GO:0016327; cellular_component; apicolateral plasma membrane GO:0016328; cellular_component; lateral plasma membrane GO:0019904; molecular_function; protein domain specific binding GO:0030054; cellular_component; cell junction GO:0030139; cellular_component; endocytic vesicle GO:0031410; cellular_component; cytoplasmic vesicle GO:0045216; biological_process; cell-cell junction organization GO:0070673; biological_process; response to interleukin-18 GO:0070830; biological_process; bicellular tight junction assembly GO:0071356; biological_process; cellular response to tumor necrosis factor
Type	Genomic
Sequence	HORVU.MOREX.r2.4HG0317910.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)