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GrainGenes Probe Report: HORVU.MOREX.r2.4HG0317110

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.4HG0317110
Locus	HORVU.MOREX.r2.4HG0317110.1
URL	Gene Ontology GO:0003824 [ Show all 24 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 26 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Threonine--tRNA ligase GO:0003824; molecular_function; catalytic activity GO:0004312; molecular_function; fatty acid synthase activity GO:0004313; molecular_function; [acyl-carrier-protein] S-acetyltransferase activity GO:0004314; molecular_function; [acyl-carrier-protein] S-malonyltransferase activity GO:0004318; molecular_function; enoyl-[acyl-carrier-protein] reductase (NADH) activity GO:0004320; molecular_function; oleoyl-[acyl-carrier-protein] hydrolase activity GO:0004321; molecular_function; fatty-acyl-CoA synthase activity GO:0005835; cellular_component; fatty acid synthase complex GO:0006629; biological_process; lipid metabolic process GO:0006631; biological_process; fatty acid metabolic process GO:0006633; biological_process; fatty acid biosynthetic process GO:0008152; biological_process; metabolic process GO:0016295; molecular_function; myristoyl-[acyl-carrier-protein] hydrolase activity GO:0016296; molecular_function; palmitoyl-[acyl-carrier-protein] hydrolase activity GO:0016297; molecular_function; acyl-[acyl-carrier-protein] hydrolase activity GO:0016419; molecular_function; S-malonyltransferase activity GO:0016491; molecular_function; oxidoreductase activity GO:0016740; molecular_function; transferase activity GO:0016787; molecular_function; hydrolase activity GO:0016829; molecular_function; lyase activity GO:0019171; molecular_function; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity GO:0042759; biological_process; long-chain fatty acid biosynthetic process GO:0047451; molecular_function; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity GO:0055114; biological_process; oxidation-reduction process
Type	Genomic
Sequence	HORVU.MOREX.r2.4HG0317110.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)