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GrainGenes Probe Report: HORVU.MOREX.r2.4HG0316560

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.4HG0316560
Locus	HORVU.MOREX.r2.4HG0316560.1
URL	Gene Ontology GO:0003097 [ Show all 58 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 60 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Transposon protein, putative, Mutator sub-class GO:0003097; biological_process; renal water transport GO:0005223; molecular_function; intracellular cGMP-activated cation channel activity GO:0005267; molecular_function; potassium channel activity GO:0005372; molecular_function; water transmembrane transporter activity GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0005886; cellular_component; plasma membrane GO:0005887; cellular_component; integral component of plasma membrane GO:0005903; cellular_component; brush border GO:0006182; biological_process; cGMP biosynthetic process GO:0006833; biological_process; water transport GO:0006884; biological_process; cell volume homeostasis GO:0008519; molecular_function; ammonium transmembrane transporter activity GO:0009925; cellular_component; basal plasma membrane GO:0015168; molecular_function; glycerol transmembrane transporter activity GO:0015250; molecular_function; water channel activity GO:0015267; molecular_function; channel activity GO:0015670; biological_process; carbon dioxide transport GO:0015696; biological_process; ammonium transport GO:0015793; biological_process; glycerol transport GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016323; cellular_component; basolateral plasma membrane GO:0016324; cellular_component; apical plasma membrane GO:0019725; biological_process; cellular homeostasis GO:0021670; biological_process; lateral ventricle development GO:0022857; molecular_function; transmembrane transporter activity GO:0030184; molecular_function; nitric oxide transmembrane transporter activity GO:0030185; biological_process; nitric oxide transport GO:0030950; biological_process; establishment or maintenance of actin cytoskeleton polarity GO:0031526; cellular_component; brush border membrane GO:0031965; cellular_component; nuclear membrane GO:0034644; biological_process; cellular response to UV GO:0035377; biological_process; transepithelial water transport GO:0035378; biological_process; carbon dioxide transmembrane transport GO:0035379; molecular_function; carbon dioxide transmembrane transporter activity GO:0042383; cellular_component; sarcolemma GO:0042493; biological_process; response to drug GO:0043066; biological_process; negative regulation of apoptotic process GO:0045177; cellular_component; apical part of cell GO:0045766; biological_process; positive regulation of angiogenesis GO:0046878; biological_process; positive regulation of saliva secretion GO:0048146; biological_process; positive regulation of fibroblast proliferation GO:0055085; biological_process; transmembrane transport GO:0070301; biological_process; cellular response to hydrogen peroxide GO:0071241; biological_process; cellular response to inorganic substance GO:0071260; biological_process; cellular response to mechanical stimulus GO:0071280; biological_process; cellular response to copper ion GO:0071288; biological_process; cellular response to mercury ion GO:0071300; biological_process; cellular response to retinoic acid GO:0071320; biological_process; cellular response to cAMP GO:0071456; biological_process; cellular response to hypoxia GO:0071472; biological_process; cellular response to salt stress GO:0071474; biological_process; cellular hyperosmotic response GO:0071549; biological_process; cellular response to dexamethasone stimulus GO:0071805; biological_process; potassium ion transmembrane transport GO:0072488; biological_process; ammonium transmembrane transport GO:0085018; biological_process; maintenance of symbiont-containing vacuole by host
Type	Genomic
Sequence	HORVU.MOREX.r2.4HG0316560.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)