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GrainGenes Probe Report: HORVU.MOREX.r2.4HG0304570

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.4HG0304570
Locus	HORVU.MOREX.r2.4HG0304570.1
URL	Gene Ontology GO:0003779 [ Show all 25 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 27 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Basic leucine zipper and W2 domain-containing protein 2 GO:0003779; molecular_function; actin binding GO:0005737; cellular_component; cytoplasm GO:0005856; cellular_component; cytoskeleton GO:0005862; cellular_component; muscle thin filament tropomyosin GO:0005884; cellular_component; actin filament GO:0006936; biological_process; muscle contraction GO:0008307; molecular_function; structural constituent of muscle GO:0015629; cellular_component; actin cytoskeleton GO:0030049; biological_process; muscle filament sliding GO:0030336; biological_process; negative regulation of cell migration GO:0031529; biological_process; ruffle organization GO:0032781; biological_process; positive regulation of ATPase activity GO:0032991; cellular_component; protein-containing complex GO:0042060; biological_process; wound healing GO:0042802; molecular_function; identical protein binding GO:0042803; molecular_function; protein homodimerization activity GO:0043462; biological_process; regulation of ATPase activity GO:0045785; biological_process; positive regulation of cell adhesion GO:0046982; molecular_function; protein heterodimerization activity GO:0047485; molecular_function; protein N-terminus binding GO:0051015; molecular_function; actin filament binding GO:0051496; biological_process; positive regulation of stress fiber assembly GO:0051693; biological_process; actin filament capping GO:0060048; biological_process; cardiac muscle contraction GO:0097718; molecular_function; disordered domain specific binding
Type	Genomic
Sequence	HORVU.MOREX.r2.4HG0304570.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)