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GrainGenes Probe Report: HORVU.MOREX.r2.4HG0294490

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.4HG0294490
Locus	HORVU.MOREX.r2.4HG0294490.1
URL	Gene Ontology GO:0000132 [ Show all 61 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 63 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: B3 domain-containing protein GO:0000132; biological_process; establishment of mitotic spindle orientation GO:0000226; biological_process; microtubule cytoskeleton organization GO:0000775; cellular_component; chromosome, centromeric region GO:0000776; cellular_component; kinetochore GO:0000777; cellular_component; condensed chromosome kinetochore GO:0001764; biological_process; neuron migration GO:0001833; biological_process; inner cell mass cell proliferation GO:0005515; molecular_function; protein binding GO:0005635; cellular_component; nuclear envelope GO:0005694; cellular_component; chromosome GO:0005737; cellular_component; cytoplasm GO:0005813; cellular_component; centrosome GO:0005815; cellular_component; microtubule organizing center GO:0005819; cellular_component; spindle GO:0005829; cellular_component; cytosol GO:0005856; cellular_component; cytoskeleton GO:0005871; cellular_component; kinesin complex GO:0005874; cellular_component; microtubule GO:0005875; cellular_component; microtubule associated complex GO:0006508; biological_process; proteolysis GO:0007020; biological_process; microtubule nucleation GO:0007059; biological_process; chromosome segregation GO:0007100; biological_process; mitotic centrosome separation GO:0007275; biological_process; multicellular organism development GO:0007399; biological_process; nervous system development GO:0008017; molecular_function; microtubule binding GO:0008021; cellular_component; synaptic vesicle GO:0008090; biological_process; retrograde axonal transport GO:0008286; biological_process; insulin receptor signaling pathway GO:0010975; biological_process; regulation of neuron projection development GO:0016477; biological_process; cell migration GO:0021799; biological_process; cerebral cortex radially oriented cell migration GO:0021955; biological_process; central nervous system neuron axonogenesis GO:0030154; biological_process; cell differentiation GO:0030424; cellular_component; axon GO:0031175; biological_process; neuron projection development GO:0031252; cellular_component; cell leading edge GO:0032418; biological_process; lysosome localization GO:0033157; biological_process; regulation of intracellular protein transport GO:0042802; molecular_function; identical protein binding GO:0043014; molecular_function; alpha-tubulin binding GO:0043203; cellular_component; axon hillock GO:0043547; biological_process; positive regulation of GTPase activity GO:0044297; cellular_component; cell body GO:0044877; molecular_function; protein-containing complex binding GO:0045773; biological_process; positive regulation of axon extension GO:0047496; biological_process; vesicle transport along microtubule GO:0048487; molecular_function; beta-tubulin binding GO:0048680; biological_process; positive regulation of axon regeneration GO:0051081; biological_process; nuclear envelope disassembly GO:0051303; biological_process; establishment of chromosome localization GO:0051642; biological_process; centrosome localization GO:0060052; biological_process; neurofilament cytoskeleton organization GO:0060053; cellular_component; neurofilament cytoskeleton GO:0070012; molecular_function; oligopeptidase activity GO:0090630; biological_process; activation of GTPase activity GO:0090724; cellular_component; central region of growth cone GO:1900029; biological_process; positive regulation of ruffle assembly GO:1904115; cellular_component; axon cytoplasm GO:1990138; biological_process; neuron projection extension GO:2000574; biological_process; regulation of microtubule motor activity
Type	Genomic
Sequence	HORVU.MOREX.r2.4HG0294490.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)