Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: HORVU.MOREX.r2.4HG0286190

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.4HG0286190
Locus	HORVU.MOREX.r2.4HG0286190.1
URL	Gene Ontology GO:0099132 [ Show all 14 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 17 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Condensin-2 complex subunit G2 GO:0098655; biological_process; cation transmembrane transport The GO term GO:0099132 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0098655 GO:0000166; molecular_function; nucleotide binding GO:0003684; molecular_function; damaged DNA binding GO:0003887; molecular_function; DNA-directed DNA polymerase activity GO:0005388; molecular_function; calcium transmembrane transporter activity, phosphorylative mechanism GO:0005524; molecular_function; ATP binding GO:0006281; biological_process; DNA repair GO:0006811; biological_process; ion transport GO:0006816; biological_process; calcium ion transport GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016787; molecular_function; hydrolase activity GO:0070588; biological_process; calcium ion transmembrane transport GO:0071897; biological_process; DNA biosynthetic process
Type	Genomic
Sequence	HORVU.MOREX.r2.4HG0286190.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)