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GrainGenes Probe Report: HORVU.MOREX.r2.4HG0284170

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.4HG0284170
Locus	HORVU.MOREX.r2.4HG0284170.1
URL	Gene Ontology GO:0099132 [ Show all 17 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 20 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Syntaxin, putative GO:0098655; biological_process; cation transmembrane transport The GO term GO:0099132 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0098655 GO:0009409; biological_process; response to cold GO:0009507; cellular_component; chloroplast GO:0009534; cellular_component; chloroplast thylakoid GO:0009535; cellular_component; chloroplast thylakoid membrane GO:0009579; cellular_component; thylakoid GO:0009735; biological_process; response to cytokinin GO:0009772; biological_process; photosynthetic electron transport in photosystem II GO:0009773; biological_process; photosynthetic electron transport in photosystem I GO:0009941; cellular_component; chloroplast envelope GO:0010287; cellular_component; plastoglobule GO:0010319; cellular_component; stromule GO:0015979; biological_process; photosynthesis GO:0015986; biological_process; ATP synthesis coupled proton transport GO:0016020; cellular_component; membrane GO:0042742; biological_process; defense response to bacterium GO:0046933; molecular_function; proton-transporting ATP synthase activity, rotational mechanism
Type	Genomic
Sequence	HORVU.MOREX.r2.4HG0284170.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)