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GrainGenes Probe Report: HORVU.MOREX.r2.4HG0283350

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.4HG0283350
Locus	HORVU.MOREX.r2.4HG0283350.1
URL	Gene Ontology GO:0099132 [ Show all 12 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 15 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: F-box family protein GO:0098655; biological_process; cation transmembrane transport The GO term GO:0099132 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0098655 GO:0000166; molecular_function; nucleotide binding GO:0005388; molecular_function; calcium transmembrane transporter activity, phosphorylative mechanism GO:0005524; molecular_function; ATP binding GO:0005783; cellular_component; endoplasmic reticulum GO:0006811; biological_process; ion transport GO:0006816; biological_process; calcium ion transport GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016787; molecular_function; hydrolase activity GO:0033017; cellular_component; sarcoplasmic reticulum membrane GO:0070588; biological_process; calcium ion transmembrane transport
Type	Genomic
Sequence	HORVU.MOREX.r2.4HG0283350.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)