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GrainGenes Probe Report: HORVU.MOREX.r2.4HG0280200

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.4HG0280200
Locus	HORVU.MOREX.r2.4HG0280200.1
URL	Gene Ontology GO:0005783 [ Show all 20 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 22 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: RING finger protein GO:0005783; cellular_component; endoplasmic reticulum GO:0005789; cellular_component; endoplasmic reticulum membrane GO:0006629; biological_process; lipid metabolic process GO:0006631; biological_process; fatty acid metabolic process GO:0006633; biological_process; fatty acid biosynthetic process GO:0006636; biological_process; unsaturated fatty acid biosynthetic process GO:0009922; molecular_function; fatty acid elongase activity GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016740; molecular_function; transferase activity GO:0019367; biological_process; fatty acid elongation, saturated fatty acid GO:0030148; biological_process; sphingolipid biosynthetic process GO:0030176; cellular_component; integral component of endoplasmic reticulum membrane GO:0034625; biological_process; fatty acid elongation, monounsaturated fatty acid GO:0034626; biological_process; fatty acid elongation, polyunsaturated fatty acid GO:0042761; biological_process; very long-chain fatty acid biosynthetic process GO:0102336; molecular_function; 3-oxo-arachidoyl-CoA synthase activity GO:0102337; molecular_function; 3-oxo-cerotoyl-CoA synthase activity GO:0102338; molecular_function; 3-oxo-lignoceronyl-CoA synthase activity GO:0102756; molecular_function; very-long-chain 3-ketoacyl-CoA synthase activity
Type	Genomic
Sequence	HORVU.MOREX.r2.4HG0280200.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)