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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0273390

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0273390
Locus	HORVU.MOREX.r2.3HG0273390.1
URL	Gene Ontology GO:0000790 [ Show all 21 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 23 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Pathogenesis-related protein 1 GO:0000790; cellular_component; nuclear chromatin GO:0000981; molecular_function; DNA-binding transcription factor activity, RNA polymerase II-specific GO:0003677; molecular_function; DNA binding GO:0003713; molecular_function; transcription coactivator activity GO:0005515; molecular_function; protein binding GO:0005634; cellular_component; nucleus GO:0005654; cellular_component; nucleoplasm GO:0006325; biological_process; chromatin organization GO:0006337; biological_process; nucleosome disassembly GO:0006338; biological_process; chromatin remodeling GO:0006351; biological_process; transcription, DNA-templated GO:0006355; biological_process; regulation of transcription, DNA-templated GO:0006357; biological_process; regulation of transcription by RNA polymerase II GO:0007399; biological_process; nervous system development GO:0016514; cellular_component; SWI/SNF complex GO:0032991; cellular_component; protein-containing complex GO:0043044; biological_process; ATP-dependent chromatin remodeling GO:0045892; biological_process; negative regulation of transcription, DNA-templated GO:0045893; biological_process; positive regulation of transcription, DNA-templated GO:0071564; cellular_component; npBAF complex GO:0071565; cellular_component; nBAF complex
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0273390.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)