GrainGenes Probe Report: HORVU.MOREX.r2.3HG0272310
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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
Probe
HORVU.MOREX.r2.3HG0272310
Locus
HORVU.MOREX.r2.3HG0272310.1
URL
Gene Ontology GO:0000166
[ Show all 12 ]
Reference
Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 14 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Thioredoxin GO:0000166; molecular_function; nucleotide binding GO:0004163; molecular_function; diphosphomevalonate decarboxylase activity GO:0005524; molecular_function; ATP binding GO:0005829; cellular_component; cytosol GO:0006629; biological_process; lipid metabolic process GO:0006694; biological_process; steroid biosynthetic process GO:0008202; biological_process; steroid metabolic process GO:0008299; biological_process; isoprenoid biosynthetic process GO:0016126; biological_process; sterol biosynthetic process GO:0016829; molecular_function; lyase activity GO:0016831; molecular_function; carboxy-lyase activity GO:0019287; biological_process; isopentenyl diphosphate biosynthetic process, mevalonate pathway
Type
Genomic
Sequence
HORVU.MOREX.r2.3HG0272310.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)
GrainGenes Probe Report: HORVU.MOREX.r2.3HG0272310
[Submit comment/correction][What is a probe?]
Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
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