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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0268730

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0268730
Locus	HORVU.MOREX.r2.3HG0268730.1
URL	Gene Ontology GO:0003676 [ Show all 23 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 25 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: E3 ubiquitin-protein ligase NRDP1 GO:0003676; molecular_function; nucleic acid binding GO:0003723; molecular_function; RNA binding GO:0003725; molecular_function; double-stranded RNA binding GO:0003729; molecular_function; mRNA binding GO:0003730; molecular_function; mRNA 3'-UTR binding GO:0005515; molecular_function; protein binding GO:0005634; cellular_component; nucleus GO:0005654; cellular_component; nucleoplasm GO:0005737; cellular_component; cytoplasm GO:0005829; cellular_component; cytosol GO:0010494; cellular_component; cytoplasmic stress granule GO:0017091; molecular_function; AU-rich element binding GO:0019901; molecular_function; protein kinase binding GO:0035198; molecular_function; miRNA binding GO:0035925; molecular_function; mRNA 3'-UTR AU-rich region binding GO:0042803; molecular_function; protein homodimerization activity GO:0045727; biological_process; positive regulation of translation GO:0048255; biological_process; mRNA stabilization GO:0051260; biological_process; protein homooligomerization GO:0060965; biological_process; negative regulation of gene silencing by miRNA GO:0070935; biological_process; 3'-UTR-mediated mRNA stabilization GO:1990904; cellular_component; ribonucleoprotein complex GO:2000036; biological_process; regulation of stem cell population maintenance
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0268730.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)