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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0268670

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0268670
Locus	HORVU.MOREX.r2.3HG0268670.1
URL	Gene Ontology GO:0000175 [ Show all 13 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 15 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: AT hook motif DNA-binding family protein GO:0000175; molecular_function; 3'-5'-exoribonuclease activity GO:0000291; biological_process; nuclear-transcribed mRNA catabolic process, exonucleolytic GO:0000932; cellular_component; P-body GO:0003723; molecular_function; RNA binding GO:0004518; molecular_function; nuclease activity GO:0004527; molecular_function; exonuclease activity GO:0005737; cellular_component; cytoplasm GO:0016787; molecular_function; hydrolase activity GO:0034427; biological_process; nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' GO:0046872; molecular_function; metal ion binding GO:0090305; biological_process; nucleic acid phosphodiester bond hydrolysis GO:0090503; biological_process; RNA phosphodiester bond hydrolysis, exonucleolytic GO:1990074; biological_process; polyuridylation-dependent mRNA catabolic process
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0268670.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)