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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0268040

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0268040
Locus	HORVU.MOREX.r2.3HG0268040.1
URL	Gene Ontology GO:0004553 [ Show all 15 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 17 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Pesticidal crystal protein Cry1Ca GO:0004553; molecular_function; hydrolase activity, hydrolyzing O-glycosyl compounds GO:0004563; molecular_function; beta-N-acetylhexosaminidase activity GO:0005737; cellular_component; cytoplasm GO:0005975; biological_process; carbohydrate metabolic process GO:0007049; biological_process; cell cycle GO:0008152; biological_process; metabolic process GO:0008360; biological_process; regulation of cell shape GO:0009252; biological_process; peptidoglycan biosynthetic process GO:0009254; biological_process; peptidoglycan turnover GO:0016787; molecular_function; hydrolase activity GO:0016798; molecular_function; hydrolase activity, acting on glycosyl bonds GO:0046677; biological_process; response to antibiotic GO:0051301; biological_process; cell division GO:0071555; biological_process; cell wall organization GO:0102148; molecular_function; N-acetyl-beta-D-galactosaminidase activity
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0268040.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)