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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0265250

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0265250
Locus	HORVU.MOREX.r2.3HG0265250.1
URL	Gene Ontology GO:0000166 [ Show all 29 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 31 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Transducin/WD40 repeat protein GO:0000166; molecular_function; nucleotide binding GO:0003924; molecular_function; GTPase activity GO:0005525; molecular_function; GTP binding GO:0005575; cellular_component; cellular_component GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0005764; cellular_component; lysosome GO:0006915; biological_process; apoptotic process GO:0008150; biological_process; biological_process GO:0008219; biological_process; cell death GO:0009267; biological_process; cellular response to starvation GO:0010506; biological_process; regulation of autophagy GO:0010507; biological_process; negative regulation of autophagy GO:0019048; biological_process; modulation by virus of host process GO:0031625; molecular_function; ubiquitin protein ligase binding GO:0032008; biological_process; positive regulation of TOR signaling GO:0034198; biological_process; cellular response to amino acid starvation GO:0034448; cellular_component; EGO complex GO:0034613; biological_process; cellular protein localization GO:0042803; molecular_function; protein homodimerization activity GO:0043200; biological_process; response to amino acid GO:0045919; biological_process; positive regulation of cytolysis GO:0046982; molecular_function; protein heterodimerization activity GO:0051219; molecular_function; phosphoprotein binding GO:0071230; biological_process; cellular response to amino acid stimulus GO:1903432; biological_process; regulation of TORC1 signaling GO:1904263; biological_process; positive regulation of TORC1 signaling GO:1990130; cellular_component; GATOR1 complex GO:1990131; cellular_component; Gtr1-Gtr2 GTPase complex
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0265250.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)