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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0261010

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0261010
Locus	HORVU.MOREX.r2.3HG0261010.1
URL	Gene Ontology GO:0000166 [ Show all 18 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 20 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Prefoldin subunit 5 GO:0000166; molecular_function; nucleotide binding GO:0001172; biological_process; transcription, RNA-templated GO:0003824; molecular_function; catalytic activity GO:0003968; molecular_function; RNA-directed 5'-3' RNA polymerase activity GO:0004482; molecular_function; mRNA (guanine-N7-)-methyltransferase activity GO:0005524; molecular_function; ATP binding GO:0006139; biological_process; nucleobase-containing compound metabolic process GO:0006370; biological_process; 7-methylguanosine mRNA capping GO:0006397; biological_process; mRNA processing GO:0008152; biological_process; metabolic process GO:0008168; molecular_function; methyltransferase activity GO:0016740; molecular_function; transferase activity GO:0016779; molecular_function; nucleotidyltransferase activity GO:0019012; cellular_component; virion GO:0030430; cellular_component; host cell cytoplasm GO:0032259; biological_process; methylation GO:0039689; biological_process; negative stranded viral RNA replication GO:0106005; biological_process; RNA 5'-cap (guanine-N7)-methylation
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0261010.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)