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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0256880

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0256880
Locus	HORVU.MOREX.r2.3HG0256880.1
URL	Gene Ontology GO:0000784 [ Show all 8 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 10 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Transposon protein, putative, Mutator sub-class GO:0000784; cellular_component; nuclear chromosome, telomeric region GO:0003684; molecular_function; damaged DNA binding GO:0006303; biological_process; double-strand break repair via nonhomologous end joining GO:0016874; molecular_function; ligase activity GO:0031848; biological_process; protection from non-homologous end joining at telomere GO:0035312; molecular_function; 5'-3' exodeoxyribonuclease activity GO:0036297; biological_process; interstrand cross-link repair GO:0090305; biological_process; nucleic acid phosphodiester bond hydrolysis
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0256880.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)