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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0255370

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0255370
Locus	HORVU.MOREX.r2.3HG0255370.1
URL	Gene Ontology GO:0000166 [ Show all 40 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 42 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Ribonuclease GO:0000166; molecular_function; nucleotide binding GO:0000287; molecular_function; magnesium ion binding GO:0001784; molecular_function; phosphotyrosine residue binding GO:0003785; molecular_function; actin monomer binding GO:0004672; molecular_function; protein kinase activity GO:0004713; molecular_function; protein tyrosine kinase activity GO:0004715; molecular_function; non-membrane spanning protein tyrosine kinase activity GO:0005102; molecular_function; signaling receptor binding GO:0005515; molecular_function; protein binding GO:0005524; molecular_function; ATP binding GO:0005737; cellular_component; cytoplasm GO:0005829; cellular_component; cytosol GO:0005856; cellular_component; cytoskeleton GO:0006464; biological_process; cellular protein modification process GO:0006468; biological_process; protein phosphorylation GO:0007155; biological_process; cell adhesion GO:0007165; biological_process; signal transduction GO:0007169; biological_process; transmembrane receptor protein tyrosine kinase signaling pathway GO:0007204; biological_process; positive regulation of cytosolic calcium ion concentration GO:0010506; biological_process; regulation of autophagy GO:0010863; biological_process; positive regulation of phospholipase C activity GO:0010976; biological_process; positive regulation of neuron projection development GO:0015629; cellular_component; actin cytoskeleton GO:0016301; molecular_function; kinase activity GO:0016310; biological_process; phosphorylation GO:0016740; molecular_function; transferase activity GO:0018108; biological_process; peptidyl-tyrosine phosphorylation GO:0030100; biological_process; regulation of endocytosis GO:0030145; molecular_function; manganese ion binding GO:0030155; biological_process; regulation of cell adhesion GO:0031234; cellular_component; extrinsic component of cytoplasmic side of plasma membrane GO:0038083; biological_process; peptidyl-tyrosine autophosphorylation GO:0042127; biological_process; regulation of cell population proliferation GO:0045087; biological_process; innate immune response GO:0046872; molecular_function; metal ion binding GO:0051015; molecular_function; actin filament binding GO:0051353; biological_process; positive regulation of oxidoreductase activity GO:0071300; biological_process; cellular response to retinoic acid GO:2000145; biological_process; regulation of cell motility GO:2000249; biological_process; regulation of actin cytoskeleton reorganization
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0255370.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)