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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0254850
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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe
HORVU.MOREX.r2.3HG0254850

Locus
HORVU.MOREX.r2.3HG0254850.1

URL
Gene Ontology GO:0000150

[ Show all 16 ]

Reference

Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.

General Remarks
[ Hide all but 1 of 18 ]
Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta).
Functional annotation published with the genome: U-box domain-containing family protein
GO:0000150; molecular_function; recombinase activity
GO:0000166; molecular_function; nucleotide binding
GO:0000400; molecular_function; four-way junction DNA binding
GO:0000730; biological_process; DNA recombinase assembly
GO:0003677; molecular_function; DNA binding
GO:0003690; molecular_function; double-stranded DNA binding
GO:0003697; molecular_function; single-stranded DNA binding
GO:0005524; molecular_function; ATP binding
GO:0006259; biological_process; DNA metabolic process
GO:0006281; biological_process; DNA repair
GO:0006310; biological_process; DNA recombination
GO:0006312; biological_process; mitotic recombination
GO:0006974; biological_process; cellular response to DNA damage stimulus
GO:0008094; molecular_function; DNA-dependent ATPase activity
GO:0010212; biological_process; response to ionizing radiation
GO:0042148; biological_process; strand invasion

Type
Genomic

Sequence
HORVU.MOREX.r2.3HG0254850.1

Source Species
Hordeum vulgare

Source Germplasm
Morex (barley)