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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0249890

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0249890
Locus	HORVU.MOREX.r2.3HG0249890.1
URL	Gene Ontology GO:0003676 [ Show all 18 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 20 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Transcription factor GO:0003676; molecular_function; nucleic acid binding GO:0003677; molecular_function; DNA binding GO:0003684; molecular_function; damaged DNA binding GO:0003824; molecular_function; catalytic activity GO:0003906; molecular_function; DNA-(apurinic or apyrimidinic site) endonuclease activity GO:0006281; biological_process; DNA repair GO:0006284; biological_process; base-excision repair GO:0006289; biological_process; nucleotide-excision repair GO:0006974; biological_process; cellular response to DNA damage stimulus GO:0008152; biological_process; metabolic process GO:0008270; molecular_function; zinc ion binding GO:0008534; molecular_function; oxidized purine nucleobase lesion DNA N-glycosylase activity GO:0016787; molecular_function; hydrolase activity GO:0016798; molecular_function; hydrolase activity, acting on glycosyl bonds GO:0016799; molecular_function; hydrolase activity, hydrolyzing N-glycosyl compounds GO:0016829; molecular_function; lyase activity GO:0046872; molecular_function; metal ion binding GO:0140078; molecular_function; class I DNA-(apurinic or apyrimidinic site) endonuclease activity
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0249890.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)