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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0230420

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0230420
Locus	HORVU.MOREX.r2.3HG0230420.1
URL	Gene Ontology GO:0000166 [ Show all 18 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 20 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: WRKY transcription factor GO:0000166; molecular_function; nucleotide binding GO:0004747; molecular_function; ribokinase activity GO:0005524; molecular_function; ATP binding GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0005975; biological_process; carbohydrate metabolic process GO:0006014; biological_process; D-ribose metabolic process GO:0009116; biological_process; nucleoside metabolic process GO:0009507; cellular_component; chloroplast GO:0009570; cellular_component; chloroplast stroma GO:0016301; molecular_function; kinase activity GO:0016310; biological_process; phosphorylation GO:0016740; molecular_function; transferase activity GO:0016773; molecular_function; phosphotransferase activity, alcohol group as acceptor GO:0019303; biological_process; D-ribose catabolic process GO:0042646; cellular_component; plastid nucleoid GO:0046835; biological_process; carbohydrate phosphorylation GO:0046872; molecular_function; metal ion binding
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0230420.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)