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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0229070

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0229070
Locus	HORVU.MOREX.r2.3HG0229070.1
URL	Gene Ontology GO:0032947 [ Show all 33 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 36 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: CTP synthase GO:0060090; molecular_function; molecular adaptor activity The GO term GO:0032947 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0060090 GO:0004691; molecular_function; cAMP-dependent protein kinase activity GO:0005078; molecular_function; MAP-kinase scaffold activity GO:0005085; molecular_function; guanyl-nucleotide exchange factor activity GO:0005089; molecular_function; Rho guanyl-nucleotide exchange factor activity GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0005829; cellular_component; cytosol GO:0005856; cellular_component; cytoskeleton GO:0005938; cellular_component; cell cortex GO:0006468; biological_process; protein phosphorylation GO:0007186; biological_process; G protein-coupled receptor signaling pathway GO:0007507; biological_process; heart development GO:0010611; biological_process; regulation of cardiac muscle hypertrophy GO:0016020; cellular_component; membrane GO:0017048; molecular_function; Rho GTPase binding GO:0030864; cellular_component; cortical actin cytoskeleton GO:0035023; biological_process; regulation of Rho protein signal transduction GO:0035025; biological_process; positive regulation of Rho protein signal transduction GO:0035556; biological_process; intracellular signal transduction GO:0043123; biological_process; positive regulation of I-kappaB kinase/NF-kappaB signaling GO:0043406; biological_process; positive regulation of MAP kinase activity GO:0045859; biological_process; regulation of protein kinase activity GO:0046872; molecular_function; metal ion binding GO:0048471; cellular_component; perinuclear region of cytoplasm GO:0051018; molecular_function; protein kinase A binding GO:0051168; biological_process; nuclear export GO:0055007; biological_process; cardiac muscle cell differentiation GO:0060297; biological_process; regulation of sarcomere organization GO:0060348; biological_process; bone development GO:0071875; biological_process; adrenergic receptor signaling pathway GO:0086023; biological_process; adenylate cyclase-activating adrenergic receptor signaling pathway involved in heart process GO:1900169; biological_process; regulation of glucocorticoid mediated signaling pathway
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0229070.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)