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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0228610

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0228610
Locus	HORVU.MOREX.r2.3HG0228610.1
URL	Gene Ontology GO:0000038 [ Show all 16 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 18 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: WD repeat-containing protein 43 GO:0000038; biological_process; very long-chain fatty acid metabolic process GO:0000166; molecular_function; nucleotide binding GO:0001676; biological_process; long-chain fatty acid metabolic process GO:0003824; molecular_function; catalytic activity GO:0004467; molecular_function; long-chain fatty acid-CoA ligase activity GO:0005524; molecular_function; ATP binding GO:0005737; cellular_component; cytoplasm GO:0006629; biological_process; lipid metabolic process GO:0006631; biological_process; fatty acid metabolic process GO:0008152; biological_process; metabolic process GO:0016874; molecular_function; ligase activity GO:0031410; cellular_component; cytoplasmic vesicle GO:0031957; molecular_function; very long-chain fatty acid-CoA ligase activity GO:0043231; cellular_component; intracellular membrane-bounded organelle GO:0051384; biological_process; response to glucocorticoid GO:0102391; molecular_function; decanoate-CoA ligase activity
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0228610.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)