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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0218430

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0218430
Locus	HORVU.MOREX.r2.3HG0218430.1
URL	Gene Ontology GO:0003723 [ Show all 11 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 13 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Redox-sensing transcriptional repressor Rex GO:0003723; molecular_function; RNA binding GO:0016032; biological_process; viral process GO:0030430; cellular_component; host cell cytoplasm GO:0030683; biological_process; mitigation of host immune response by virus GO:0039502; biological_process; suppression by virus of host type I interferon-mediated signaling pathway GO:0039503; biological_process; suppression by virus of host innate immune response GO:0039524; biological_process; suppression by virus of host mRNA processing GO:0039540; biological_process; suppression by virus of host RIG-I activity GO:0039580; biological_process; suppression by virus of host PKR activity GO:0039657; biological_process; suppression by virus of host gene expression GO:0042025; cellular_component; host cell nucleus
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0218430.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)