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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0200190

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0200190
Locus	HORVU.MOREX.r2.3HG0200190.1
URL	Gene Ontology GO:0000049 [ Show all 12 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 14 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Rho GTPase-activating protein 1 GO:0000049; molecular_function; tRNA binding GO:0000166; molecular_function; nucleotide binding GO:0003723; molecular_function; RNA binding GO:0004810; molecular_function; tRNA adenylyltransferase activity GO:0005524; molecular_function; ATP binding GO:0005737; cellular_component; cytoplasm GO:0009228; biological_process; thiamine biosynthetic process GO:0009229; biological_process; thiamine diphosphate biosynthetic process GO:0016740; molecular_function; transferase activity GO:0016783; molecular_function; sulfurtransferase activity GO:0034227; biological_process; tRNA thio-modification GO:0052837; biological_process; thiazole biosynthetic process
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0200190.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)