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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0197740

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.3HG0197740
Locus	HORVU.MOREX.r2.3HG0197740.1
URL	Gene Ontology GO:0001933 [ Show all 35 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 37 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Choline/ethanolamine kinase GO:0001933; biological_process; negative regulation of protein phosphorylation GO:0001937; biological_process; negative regulation of endothelial cell proliferation GO:0004854; molecular_function; xanthine dehydrogenase activity GO:0004855; molecular_function; xanthine oxidase activity GO:0005506; molecular_function; iron ion binding GO:0005576; cellular_component; extracellular region GO:0005615; cellular_component; extracellular space GO:0005737; cellular_component; cytoplasm GO:0005777; cellular_component; peroxisome GO:0005829; cellular_component; cytosol GO:0006195; biological_process; purine nucleotide catabolic process GO:0006919; biological_process; activation of cysteine-type endopeptidase activity involved in apoptotic process GO:0007595; biological_process; lactation GO:0009055; molecular_function; electron transfer activity GO:0009115; biological_process; xanthine catabolic process GO:0010629; biological_process; negative regulation of gene expression GO:0016491; molecular_function; oxidoreductase activity GO:0016529; cellular_component; sarcoplasmic reticulum GO:0016614; molecular_function; oxidoreductase activity, acting on CH-OH group of donors GO:0016903; molecular_function; oxidoreductase activity, acting on the aldehyde or oxo group of donors GO:0022900; biological_process; electron transport chain GO:0030856; biological_process; regulation of epithelial cell differentiation GO:0042803; molecular_function; protein homodimerization activity GO:0043546; molecular_function; molybdopterin cofactor binding GO:0045602; biological_process; negative regulation of endothelial cell differentiation GO:0046872; molecular_function; metal ion binding GO:0050660; molecular_function; flavin adenine dinucleotide binding GO:0051536; molecular_function; iron-sulfur cluster binding GO:0051537; molecular_function; 2 iron, 2 sulfur cluster binding GO:0051898; biological_process; negative regulation of protein kinase B signaling GO:0055114; biological_process; oxidation-reduction process GO:1900745; biological_process; positive regulation of p38MAPK cascade GO:1900747; biological_process; negative regulation of vascular endothelial growth factor signaling pathway GO:2000379; biological_process; positive regulation of reactive oxygen species metabolic process GO:2001213; biological_process; negative regulation of vasculogenesis
Type	Genomic
Sequence	HORVU.MOREX.r2.3HG0197740.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)