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GrainGenes Probe Report: HORVU.MOREX.r2.3HG0197170

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
HORVU.MOREX.r2.3HG0197170
Locus
HORVU.MOREX.r2.3HG0197170.1
URL
Gene Ontology GO:0003677
[ Show all 8 ]
Reference
ReferenceMonat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 10 ]
Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database).
Functional annotation published with the genome: Phosducin, thioredoxin-like domain-containing protein
GO:0003677; molecular_function; DNA binding
GO:0005634; cellular_component; nucleus
GO:0005694; cellular_component; chromosome
GO:0006260; biological_process; DNA replication
GO:0006281; biological_process; DNA repair
GO:0006351; biological_process; transcription, DNA-templated
GO:0006355; biological_process; regulation of transcription, DNA-templated
GO:0006974; biological_process; cellular response to DNA damage stimulus
Type
Genomic
Sequence
HORVU.MOREX.r2.3HG0197170.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)